PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0083s0068.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 223aa    MW: 24284 Da    PI: 4.94
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0083s0068.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260117.11.1e-3671071100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 
                          +C aCk+lrrkC+++Cv+ pyf  ++ + +fa+vhk+FGasnv+kll ++p ++r++a+ ++ yeA ar+ dPv G+v++i +l+qq+++
  Kaladp0083s0068.1.p   7 SCGACKFLRRKCTSECVFVPYFSYDEaATHFAAVHKVFGASNVSKLLMHIPVQHRSEAAVTISYEALARMTDPVFGCVAHIYALHQQIAN 96 
                          6**********************988689************************************************************* PP

               DUF260  90 lkaelallkee 100
                          l++e++ll+++
  Kaladp0083s0068.1.p  97 LQEEIDLLGSQ 107
                          *****998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MTGQGSSCGA CKFLRRKCTS ECVFVPYFSY DEAATHFAAV HKVFGASNVS KLLMHIPVQH  60
RSEAAVTISY EALARMTDPV FGCVAHIYAL HQQIANLQEE IDLLGSQMAA GFPFTFPGSQ  120
PATENLSTNQ EAFNLQQQMG HHQQAQDIVN AGYGNGAADQ SYVNQFQQLP PVWGGEAHSG  180
NYDNYLNGEI NEGLDHEPLL CCQFLNNNGN ITEIPNNAVL GW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.11e-57LBD family protein