PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0083s0071.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 237aa    MW: 26469 Da    PI: 8.3726
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0083s0071.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2156.9e-057799123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C+ C + F++   L  H+++H
  Kaladp0083s0071.1.p 77 YTCSFCRREFKSAQALGGHMNVH 99
                         9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDGHNMIEQA ESKYVMWMNR KQELMPSQLF TSSMVRAGRA AAAVASTYEQ YESWEERAFA  60
EDAARGLGGF IWPPRSYTCS FCRREFKSAQ ALGGHMNVHR RDRARLKQAL SPRRSDTKAD  120
FSPQQQTTSI VTSSEESTKV AVGGGDLLNK QERPCVLKSS GQEKEYDVST RLCMGLSLDE  180
VAKCKKLKSA SFVWVEPCLA VVQSSPSNHH DARQHGLIQS KMSLMEELDL ELRLGV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.12e-28C2H2 family protein