PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0085s0142.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 501aa    MW: 55714.1 Da    PI: 7.0458
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0085s0142.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.41.9e-063213351226
                          TS--TTTTT-SS-SS CS
              zf-CCCH  12 tGtCkyGdrCkFaHg 26 
                          +G C++Gd+C+F H+
  Kaladp0085s0142.2.p 321 SGSCPRGDKCHFVHD 335
                          7*************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    
MAAPPRILLC GDVLGRLDQL YKRFAAVNKS AGPFDVLLCV GQFFPQSSEQ LDQFMNYVEG  60
RVEIPIATYF IGDFGAGAPK VLTAASKAAQ NQGFKMDGLK ISDNLYWLKG SGKFQLQGLS  120
VAYLSGRRSS IIQPFGTYSQ DDVDALRAMA EEPEIVDIFL TNEWPSGITN KAVESGIPPG  180
VSDSSGFDST VAELVSEIKP RYHVAGTMGV FYAREPYINV DSSHVTRFLG LAPVRNKDKQ  240
KFIHAISPTP ASIMSAVEMC KKPPNASLSP YIDLEKISQA DSETKRPAES DLQYWRYDVS  300
QKRQKTGAGD AERRCFKFVS SGSCPRGDKC HFVHDNDARE QYLRGVCFDF INKGKCEKGS  360
DCSFKHSFQD NAEDVPKMRT GNGKVNRSKE CWFCLSSPNI ESHLIISIGD SFYCALPKGP  420
LLEDHVLVVP IEHAPNTLST PSESETELQK FLSSLKAYYK NLDKEVVWFE WIYRRGTHAN  480
LQVKYNFASC SWSDSVHNLQ *