PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0087s0163.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 233aa    MW: 25981.9 Da    PI: 6.273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0087s0163.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.24.8e-191868155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         s+++GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Kaladp0087s0163.1.p 18 SKFTGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 68
                         79********.7*********32...35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNKSVCNSVG NFKGKSRSKF TGVRQRPSGR WVAEIKDTTQ KIRMWLGTFE TAEEAARAYD  60
EAACLLRGSN TRTNFATRVS SNSPLALRIQ NLLKKRNGTK VEQQSSTVQS EALSPTCSIN  120
TSLFSKNVTC TSSDMAGDAQ FHDHTCRPDL TDASETTWEL NGFLYTQESL DTPKTELDCT  180
RNSEFSEFER MKVERQISAS LYALNGVQEY MDTVNDVTDA FWDLPPLCSL SH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-43ERF family protein