PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0087s0195.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 177aa    MW: 19022.2 Da    PI: 6.1196
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0087s0195.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.66.8e-5727124198
                NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkky 90 
                          vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisfvtseasdkc +ekrkt+ngddllwa++tlGfedy++pl++yl++y
  Kaladp0087s0195.1.p  27 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFVTSEASDKCLKEKRKTVNGDDLLWAMGTLGFEDYIDPLRLYLNQY 116
                          69**************************************************************************************** PP

                NF-YB  91 relegekk 98 
                          re+eg++k
  Kaladp0087s0195.1.p 117 REIEGDTK 124
                          *****975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MAEAPASPGG GGSHDSGGDH SPRSNNVREQ DRFLPIANIS RIMKKALPAN GKIAKDAKET  60
VQECVSEFIS FVTSEASDKC LKEKRKTVNG DDLLWAMGTL GFEDYIDPLR LYLNQYREIE  120
GDTKGTAKGG DASAKKDTGV HPQESNVLAS QGSYSQGMNY VNSRGQHMIV PMQGSE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.11e-78NF-YB family protein