PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0088s0008.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

FAR1

Protein Properties

Length: 667aa MW: 76503.4 Da PI: 8.1413

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0088s0008.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.1	2.4e-17	23	116	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 Y+eYA+ G++vr ++++k +r++ i+ + + C+++g ++ + + + ++r +trtgCka+l++++ +d+ ++v+++++eHn Kaladp0088s0008.1.p 23 VYKEYARISGYQVRLATTQKVTRSDCIKLQYLFCNRQGLHKFRAFNhlegdVSCGYKRRFSTRTGCKARLVLRLIRDSSYVVSDFVEEHN 112 6**********************9999999*****9999988887777888******************************* PP FAR1 87 Hela 90 H l+ Kaladp0088s0008.1.p 113 HCLT 116 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MCDEKLKPYK EKIFNSLNEG ISVYKEYARI SGYQVRLATT QKVTRSDCIK LQYLFCNRQG 60 LHKFRAFNHL EGDVSCGYKR RFSTRTGCKA RLVLRLIRDS SYVVSDFVEE HNHCLTSPEY 120 QQFLKSNRSL NFAQENFIMD CGNIKIGAKK SHKILKEISG GYANVGAQNF VGNSDAQIIL 180 DRLKSKQDLC PGFAFDYFVG TDGALQRCFW ADSIAKNNFE AFGDCVAFDA TYRTNKYNLV 240 FIPFTGVDNH KCCITLGAGL LAKENVESYE WLMESFRKIM SRGPRIWVTD QDPSMKIAIK 300 NIFPNSIHRL CMWHITKKFT EKIGNILCRD KKFLDNLDGI VCNAHYEPDV FESEWARMIE 360 DYKLQDNKWL SDMYEMRANW IPAFFRDIPM GGLLRTTSCS ECENSFFNCF FHPGMSLTEF 420 FMAFDSAMDA QRHRKDQMDH ETTSSEPIIK TSLHVEKQAA EVYTRTIFYD VQHEIIESCL 480 HCHVCSISGD DESKIYGITN EDSIHLVHHI GSNVAECICK NFQRIGLACR HIFLALKSSG 540 VTEIPDYFIS KRWTKKAVHK LDSSSFGDIA ETSASRNGSK ELWIELNAAA KSVGCHKQKI 600 DELIETLRTF RDKHSGRIVY MSKQDLFESI IGSPRPTQII VQTPQQSRNK GCGKRLMSER 660 DKIVEK*

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MCDEKLKPYK EKIFNSLNEG ISVYKEYARI SGYQVRLATT QKVTRSDCIK LQYLFCNRQG  60
LHKFRAFNHL EGDVSCGYKR RFSTRTGCKA RLVLRLIRDS SYVVSDFVEE HNHCLTSPEY  120
QQFLKSNRSL NFAQENFIMD CGNIKIGAKK SHKILKEISG GYANVGAQNF VGNSDAQIIL  180
DRLKSKQDLC PGFAFDYFVG TDGALQRCFW ADSIAKNNFE AFGDCVAFDA TYRTNKYNLV  240
FIPFTGVDNH KCCITLGAGL LAKENVESYE WLMESFRKIM SRGPRIWVTD QDPSMKIAIK  300
NIFPNSIHRL CMWHITKKFT EKIGNILCRD KKFLDNLDGI VCNAHYEPDV FESEWARMIE  360
DYKLQDNKWL SDMYEMRANW IPAFFRDIPM GGLLRTTSCS ECENSFFNCF FHPGMSLTEF  420
FMAFDSAMDA QRHRKDQMDH ETTSSEPIIK TSLHVEKQAA EVYTRTIFYD VQHEIIESCL  480
HCHVCSISGD DESKIYGITN EDSIHLVHHI GSNVAECICK NFQRIGLACR HIFLALKSSG  540
VTEIPDYFIS KRWTKKAVHK LDSSSFGDIA ETSASRNGSK ELWIELNAAA KSVGCHKQKI  600
DELIETLRTF RDKHSGRIVY MSKQDLFESI IGSPRPTQII VQTPQQSRNK GCGKRLMSER  660
DKIVEK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-89	FAR1 family protein