PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0088s0056.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 229aa    MW: 25333.3 Da    PI: 8.7734
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0088s0056.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.36.5e-33145203159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg H h+
  Kaladp0088s0056.1.p 145 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSKDEGVVITTYEGVHSHP 203
                          59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MFMAFDQISN SASSHFSLAS IMPMCSSSLR DSNQLFQSQK TTSLLAGLME MQQQGDVMKR  60
ISVEDIADGD KDSSNNNICY ENEGGGCIDD QSCNSAGMKQ LERHQKPNTA QSKGGGGGGG  120
GGAPAEKKIK KHRYAFQTRS HVDILDDGYR WRKYGQKAVK NNKFPRSYYR CTHQGCNVKK  180
QVQRLSKDEG VVITTYEGVH SHPIQKSTDN FEHILTQMQI YSNTSSTL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.13e-58WRKY family protein