PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0088s0060.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

CAMTA

Protein Properties

Length: 954aa MW: 106229 Da PI: 6.2509

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0088s0060.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	157.1	3.6e-49	12	127	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 +e ++rwlk+ e++ i+ n + +l +e++++p sgsl+Lyn++++r+frkDG++w+kk+dg+tv E+he+LKvg+ve+l+cyYah+een Kaladp0088s0060.1.p 12 REaQARWLKPAEVYYIILNCDDSQLLSESAKNPASGSLFLYNKRVLRNFRKDGHNWRKKRDGRTVGEAHERLKVGNVEALNCYYAHGEEN 101 56599*********************************************************************************** PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 p+fqrr++w+L e+ +ivlv+yl+v Kaladp0088s0060.1.p 102 PSFQRRSFWMLTGERGHIVLVQYLDV 127 *********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 954 aa Download sequence
MQSEFDISDL VREAQARWLK PAEVYYIILN CDDSQLLSES AKNPASGSLF LYNKRVLRNF 60 RKDGHNWRKK RDGRTVGEAH ERLKVGNVEA LNCYYAHGEE NPSFQRRSFW MLTGERGHIV 120 LVQYLDVANQ SPGSVSQPSH LFSSPSSHSP SSSSGTNQES VSFGGGYESQ INLPSPVSSE 180 ICSEVGIDNS MLDYYNSLRN ASETMTVSND SNVKVNEALR RIEEQLSLND ENVNEINSIR 240 SPDGKLNISN FEDFPMEIAY QGQPDDFLDG SEYAARDRGC AGVKNGFNSV MHEAGDSGMS 300 RQQTSSHKEP SGDRDSVSWT DMVDFGEGEH LSPNLPEVFS PSTNRFEGPP FSSFTSSQQR 360 DLGYSFDTDQ TTIPPQVQKQ KFTILDVSPE WGYSFETTKV IIVGSFLCHP SEHAWTCMFG 420 DIEVPIQIIQ EGVILCEAPP NPSGKVTICI TSANHEPCSE VREFEYRNKT SSCSQCSARK 480 EETTMSSEEL LLLVRLAQML LCDTLGQRGD SKEQGNALSE KRNFNEDSWS LIVESLLVGS 540 GTSSGTMKWL LEEFLKDKLV KWLSSKTHNR LGESSCLLSR KEQGVIHMIA GLGYEWALTP 600 IISSGVSINF RDINGWTALH WAARFGREKM VACLIASGAL AGAVTDPNAQ DPTGKTPASI 660 AAINGHKGLA GYLSEVSLTS HLSSLKLQES EFSKGLAVLE AEHTINRISE NNMHTSEDQL 720 SLKDTLTAVR NAASAAARIQ SAYRAHSFRK RQQKNAFNTV SIDDYGFSSG ELQGLPSVSK 780 IAFRNTRDHN SAALSIQKKY KGYKGRKEFL DFRQKVVKIQ AHVRGHQTRK NYKVCWAVGI 840 LEKIVLRWRR KGVGLRGFKP EPETIDESDE EDFAKVFRKK KVEAAVDEAV SRVLSMVESS 900 EARQQYRRML ERYRQAKAQL GNAANEEASG SLTGMSNMED DQTFQYSFSL DHY*

Sequence ? help Back to Top

Protein Sequence Length: 954 aa Download sequence

MQSEFDISDL VREAQARWLK PAEVYYIILN CDDSQLLSES AKNPASGSLF LYNKRVLRNF  60
RKDGHNWRKK RDGRTVGEAH ERLKVGNVEA LNCYYAHGEE NPSFQRRSFW MLTGERGHIV  120
LVQYLDVANQ SPGSVSQPSH LFSSPSSHSP SSSSGTNQES VSFGGGYESQ INLPSPVSSE  180
ICSEVGIDNS MLDYYNSLRN ASETMTVSND SNVKVNEALR RIEEQLSLND ENVNEINSIR  240
SPDGKLNISN FEDFPMEIAY QGQPDDFLDG SEYAARDRGC AGVKNGFNSV MHEAGDSGMS  300
RQQTSSHKEP SGDRDSVSWT DMVDFGEGEH LSPNLPEVFS PSTNRFEGPP FSSFTSSQQR  360
DLGYSFDTDQ TTIPPQVQKQ KFTILDVSPE WGYSFETTKV IIVGSFLCHP SEHAWTCMFG  420
DIEVPIQIIQ EGVILCEAPP NPSGKVTICI TSANHEPCSE VREFEYRNKT SSCSQCSARK  480
EETTMSSEEL LLLVRLAQML LCDTLGQRGD SKEQGNALSE KRNFNEDSWS LIVESLLVGS  540
GTSSGTMKWL LEEFLKDKLV KWLSSKTHNR LGESSCLLSR KEQGVIHMIA GLGYEWALTP  600
IISSGVSINF RDINGWTALH WAARFGREKM VACLIASGAL AGAVTDPNAQ DPTGKTPASI  660
AAINGHKGLA GYLSEVSLTS HLSSLKLQES EFSKGLAVLE AEHTINRISE NNMHTSEDQL  720
SLKDTLTAVR NAASAAARIQ SAYRAHSFRK RQQKNAFNTV SIDDYGFSSG ELQGLPSVSK  780
IAFRNTRDHN SAALSIQKKY KGYKGRKEFL DFRQKVVKIQ AHVRGHQTRK NYKVCWAVGI  840
LEKIVLRWRR KGVGLRGFKP EPETIDESDE EDFAKVFRKK KVEAAVDEAV SRVLSMVESS  900
EARQQYRRML ERYRQAKAQL GNAANEEASG SLTGMSNMED DQTFQYSFSL DHY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein