PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0089s0001.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 237aa    MW: 25975.2 Da    PI: 9.8729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0089s0001.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.61e-20131181256
                  AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                          +y+GVr ++ +grW AeIrd +   g + r++lg+f+taeeAa+a++aa+++l+g+
  Kaladp0089s0001.1.p 131 RYRGVRKRP-WGRWSAEIRDrV---G-KCRHWLGTFDTAEEAAQAYDAAARRLRGP 181
                          59*******.**********55...2.5**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MTHESTTDLP IFSNRIIPPS YSYDPHHLLP PTLLDKDVSY LICNSHHHHH HQPMQTPQPI  60
VDAPPSSHQL LEGIAAVVGL NVLYGVQHHP TTTTAATTTT CMSSSTSVSL LPEREAAKTT  120
AGSGGGEQVI RYRGVRKRPW GRWSAEIRDR VGKCRHWLGT FDTAEEAAQA YDAAARRLRG  180
PKARTNFQIS FSPSSYPFTE SAAAATMLTA SSSRHQHPPT GPTRRRLRPP PAHMLS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.13e-22ERF family protein