PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0024.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

C2H2

Protein Properties

Length: 217aa MW: 23039.6 Da PI: 8.1671

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0024.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.2	0.00054	74	96	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C+k F + L H+ +H Kaladp0089s0024.1.p 74 HKCSVCNKAFGSYQALGGHMASH 96 79******************998 PP
2	zf-C2H2	14.7	8.6e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+ksF++ L H r+H Kaladp0089s0024.1.p 134 HECSICHKSFPTGQALGGHKRRH 156 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence
MALEALNSPA AFARFQESND HSWSAGDKRS RLVDQAGCST EEEHLALCLI SLAQGGPNKK 60 MRPSPVSSDP SAPHKCSVCN KAFGSYQALG GHMASHKRAA AVAAATAENY KDDHSKKQLH 120 SNKPASSVKA TADHECSICH KSFPTGQALG GHKRRHYEGI LGNHNSVKST STTPASIYEG 180 VQSRKNFDLN IPMPDGVVED EVSSGQQIQF GISTTP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	2e-32	C2H2 family protein