PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0089s0084.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 160aa    MW: 17405.3 Da    PI: 7.6501
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0089s0084.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.000161436123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         y+C  C++ F++   L  H++ H
  Kaladp0089s0084.1.p 14 YECVFCKRGFTTAQALGGHMNIH 36
                         99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MDVTSYDLGI GRSYECVFCK RGFTTAQALG GHMNIHRKDR AKPRLNHPSS SSLNHELSNN  60
LGFSSQVDFH QFLTPTNSSS SSNSRFHTDH AATQIGSLSA CCKENWCSAA SLGLRIGVPS  120
SHVVEEIGKR RSSSQGGFDI HHQAVEDLDL ELRLGHLNP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-13C2H2 family protein