PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0088.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 213aa MW: 23491.5 Da PI: 7.4692

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0088.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128	4.2e-40	8	109	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkC++dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +++ +++yeA+ar+rdPvyG+v++i++lqqq++ Kaladp0089s0088.1.p 8 PCGACKFLRRKCTTDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVQDRCETVVTIAYEAQARLRDPVYGCVAHIFALQQQVAI 97 7***********************99********************************************************** PP DUF260 90 lkaelallkeel 101 l+a+l+++k++l Kaladp0089s0088.1.p 98 LQAQLVQVKAQL 109 *****99885 PP

Sequence ? help Back to Top
Protein Sequence Length: 213 aa Download sequence
MASGVGSPCG ACKFLRRKCT TDCIFAPYFC SEQGPARFAA IHKVFGASNV SKLLLHVPVQ 60 DRCETVVTIA YEAQARLRDP VYGCVAHIFA LQQQVAILQA QLVQVKAQLA SNVMGNRNNA 120 TAHNMSNNNN TPSSEWPGLI YTLPNLQAYN NNHHHSVSPQ SSIESMEQNN GGVGDMKEET 180 LPYEIGSEQK KTRSYNDQLN ELQELAFRMM RD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42430.1	3e-55	LBD family protein