PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0089.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 222aa MW: 24093.5 Da PI: 7.0897

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0089.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.3	7.2e-40	7	107	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkC+k+Cv+apyf++eq +++fa++hk+FGasnv+kll++lp ++r++a+ ++ yeA+ar++dP+yG+v++i++lqqq+ + Kaladp0089s0089.1.p 7 PCGACKFLRRKCVKGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLSHLPISDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVT 96 7***********************89********************************************************** PP DUF260 90 lkaelallkee 100 l+++la+l+++ Kaladp0089s0089.1.p 97 LQSQLASLRHQ 107 *****9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MTGSGSPCGA CKFLRRKCVK GCVFAPYFCH EQGAAHFAAI HKVFGASNVS KLLSHLPISD 60 RSEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVTLQSQ LASLRHQAAQ SLANGSSSII 120 GNTMNHQDTQ QSWYQSGLSH TLNQFTQQNN HLNFHHQNVQ FSQSNPMNVG NSSMGNSGNA 180 TLVNNTMNSF GSFEETSDQS FGSNNFDDDL QSVAFGYFQN S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	5e-61	LBD family protein