PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0089s0098.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 247aa MW: 27709.1 Da PI: 6.5967

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0089s0098.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.8	4.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ l+d v ++G g+W++ ++ g+ R++k+c++rw +yl Kaladp0089s0098.1.p 14 KGPWTADEDQVLIDFVSRYGHGNWRALPKQAGLLRCGKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	55.5	1.4e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++TteE++ +++++++lG++ W++Ia++++ gRt++++k+ w+++l Kaladp0089s0098.1.p 67 RGNFTTEEEDTIINLHHMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MVRAPCCEKM GLKKGPWTAD EDQVLIDFVS RYGHGNWRAL PKQAGLLRCG KSCRLRWTNY 60 LRPDIKRGNF TTEEEDTIIN LHHMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLRRKE 120 QQPVEQQVEQ KPQLVTASTS TANNVVARGD DSAPGTCHHH VPPPSPQPSS STTEDISSSF 180 YDNELPQIDE SFWSEVLSEG EMASSNVTFP LSPLSGGFSH GGDCNGMEFW YEVFGRSGEL 240 FLPEML*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G23250.1	1e-74	MYB family protein