PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0091s0138.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 303aa    MW: 32409.1 Da    PI: 8.1635
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0091s0138.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.75.4e-1085109126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          +kt+lC+ f+  GtC+y  +C+FaH+
  Kaladp0091s0138.3.p  85 FKTKLCCKFRV-GTCPYVTNCNFAHS 109
                          69*********.*************8 PP
2zf-CCCH18.14.7e-06163183626
                          -SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                          C+ f+    C+yGd+C+++H+
  Kaladp0091s0138.3.p 163 CKKFYTAEGCPYGDSCTYIHD 183
                          99****99************7 PP
3zf-CCCH41.91.6e-13236261126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          +kt++C+ +  tG+C++G++C+FaHg
  Kaladp0091s0138.3.p 236 WKTKICNKWEMTGFCPFGSKCHFAHG 261
                          8************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGYGGESGFG NGNVVQIVTG GSSWDSGVAG NFDQAVWATD EEYTVWNGQQ SQARLGSEPA  60
NKKARSSQPA ESLTGRAKAI GKMFFKTKLC CKFRVGTCPY VTNCNFAHSL EELRKPPPNW  120
QDIVAAHDGE KKVLEPREEF KIPSVVSTDF SGDGSRSSRG RHCKKFYTAE GCPYGDSCTY  180
IHDEHSRARE SVAISLNTGG SGGGGGGSSG GGGAGGSTHY GIVVGGGPQN LKPANWKTKI  240
CNKWEMTGFC PFGSKCHFAH GAAGVPCFTI PPHLQYQSYQ CTVLAIQTWL HEYTNDFKDP  300
KI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.13e-76C3H family protein