PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0092s0159.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 838aa    MW: 92418.2 Da    PI: 6.8234
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0092s0159.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.41.2e-182078357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0092s0159.1.p 20 KYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                         5679*****************************************************97 PP
2START166.12.4e-521643712204
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++  Wv+++  ++g++++ +++ s+++ g a+ra+g+v  +++++ve+l d++  W +++++++++ v+ ++  g
  Kaladp0092s0159.1.p 164 IAEETLTEFLSKATGTAIEWVQMPGVKPGPDSIGIIAISHGCAGVAARACGLVSLEPTRVVEILKDRP-SWFRDCRAVDVVTVLPTAngG 252
                          789*******************************************************9998888888.****************9999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                          +++l +++l+a+++l+p Rdf+ +Ry+  +++g++v++++S+ ++q+ p+    +s+vRae+l Sg+li+p+++g+s +++v+hvdl+ r
  Kaladp0092s0159.1.p 253 TIELLYMQLYAPTTLAPaRDFWLIRYTSVMEDGSLVVCERSLKHTQNGPSmptVHSFVRAEMLSSGYLIRPCEGGGSIIHIVDHVDLEPR 342
                          *************************************************99999************************************ PP

                          XXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                START 176 lphwllrslvksglaegaktwvatlqrqc 204
                           ++++lr+l++s ++ ++kt++a+l++++
  Kaladp0092s0159.1.p 343 RVPEVLRPLYESPTILAQKTTMAALRQLR 371
                          *************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 838 aa     Download sequence    
MPEMMSMSCK DGKHGVDNGK YVRYTPEQVE ALERLYHECP KPSSIRRQQL IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLNALNKLLM EENDRLQKQV SQLVSENGYF  120
RQNNQKKKLA TKDTSCESVV TSGQHQLMPQ HPPRDASPAG LLSIAEETLT EFLSKATGTA  180
IEWVQMPGVK PGPDSIGIIA ISHGCAGVAA RACGLVSLEP TRVVEILKDR PSWFRDCRAV  240
DVVTVLPTAN GGTIELLYMQ LYAPTTLAPA RDFWLIRYTS VMEDGSLVVC ERSLKHTQNG  300
PSMPTVHSFV RAEMLSSGYL IRPCEGGGSI IHIVDHVDLE PRRVPEVLRP LYESPTILAQ  360
KTTMAALRQL RQLAYEVSPP NATNWARRPA ALRALSHRLS RGFNEALNGF SDEGWIVMGN  420
DGMDDVTVLI NSSPNKLMGL NLSFGNGFSP VCNTVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADNNIDA YSAAAIKVGP CNLPGIRVGG FGSQVILPLA HTIEHEELLE VIKLESVGHC  540
SEDAIMPRDM FLLQMCSGVD EHAVGTCSEL IFAPIDASFA DDAPLLPSGF RIIPLEPVKE  600
ASSPNRTLDL ASALETGTRT SNDCSSNYGS TRSVMTIAFE FACESHMQES VAAMARQYVR  660
SIISSVQRVA LALSPNLSST GSLLSPSRTP EAQTLTRWIC ASYRCSLGVE LLKASSESNE  720
SMLKTMWHHS DAIMCCSLKA MPVFTFANQA GLDMLETTLA ALQDMTLEKI FDEHGRKTLC  780
SELPQIMQQG FACLQGGICV SSMGRPVSYE RAVAWKVLND EDNAHCICLM FVNWSFV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein