PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0092s0168.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB_related
Protein Properties Length: 356aa    MW: 38593.8 Da    PI: 7.3263
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0092s0168.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding422.1e-13115159347
                          SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                          +WT+eE+ l++ + ++lG+g+W+ Iar    +Rt+ q+ s+ qky
  Kaladp0092s0168.2.p 115 PWTEEEHRLFLIGLHKLGKGDWRGIARNYVMTRTPTQVASHAQKY 159
                          8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MTRRCSHCSF DGHDSRTCPS RATSSSSPAA NCSTTTGGGG GGVKLFGVRL TDGSIMKKSA  60
SMGNLSSSPS TAAASPNPSS PASDTTGNAR AAPDGYLSDD PAHVNRRSDR KKGTPWTEEE  120
HRLFLIGLHK LGKGDWRGIA RNYVMTRTPT QVASHAQKYF IRQSNASRRK RRTSLFDMTP  180
DMETDTPPAP EHFLLPPQTS ETNHENSVSL TSQNLDAQPM EVTSDETVRE SDDTSVQTSY  240
ILPVPVVPTF YPAYVPVPFR FWSPNLAPTE EENPETSNHQ VLKPIPVIPK DPINVDELIG  300
MSQLSIKETV NGPEDSHPLS ARLLGSPSRQ SAFRPRRSAS VPNLTQDNAD SNPVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-77MYB_related family protein