PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 247aa    MW: 28281.2 Da    PI: 8.4317
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.81.1e-31959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Kaladp0093s0004.1.p  9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59
                         79***********************************************96 PP
2K-box93.92.7e-31861721399
                K-box  13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          ++++ +qe+ kLk ++e Lq++qR+llGedL +L+ keL+q+e+qLe slk+iRs+K++++l+q+ +lq ke++l e+nkaL++kle
  Kaladp0093s0004.1.p  86 DTQNNYQEYLKLKGRVEALQKTQRNLLGEDLAQLNTKELEQIEHQLEISLKQIRSTKTQYMLDQLADLQLKEQNLLETNKALKQKLE 172
                          6899*********************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS  60
PSIIKTLERY HQCSYSALEA SRPHFDTQNN YQEYLKLKGR VEALQKTQRN LLGEDLAQLN  120
TKELEQIEHQ LEISLKQIRS TKTQYMLDQL ADLQLKEQNL LETNKALKQK LEDNMERVQF  180
PQPWEEGAGH NNIPYIRLAT HSEAAFYQPI GFNPTMQLGY NNAGGNEVDG VNQPHAIGGL  240
MPGWFL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15800.13e-98MIKC_MADS family protein