PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0093s0044.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 269aa MW: 28368.4 Da PI: 10.7614

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0093s0044.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.9	5.3e-36	40	137	4	89
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 ++ ++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ a++ + + +ss + Kaladp0093s0044.1.p 40 PRKASKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVAGTLQIPTTSSSRPdpkd 129 56789*********************************************************8888854432222222222222223333 PP TCP 89 .......k 89 + Kaladp0093s0044.1.p 130 llpgqveS 137 33333321 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MGSVQKPEFD RGDDVTVTAS TAVSMKEEPF AEATKPAVPP RKASKDRHTK VEGRGRRIRM 60 PATCAARIFQ LTRELGHKSD GETIRWLLEH AEPAIIAATG TGTVPAIAMS VAGTLQIPTT 120 SSSRPDPKDL LPGQVESKKR KRVGDAFPTA TDANAAITAS SSSLKTAFAP PQVVSSRPGI 180 VPMWAIPSNA VWMVPLATNQ QPIWALSPTP TPLVTLAARP ISSAAAPSAP PPPSSASTKT 240 TPSSSSTRTH PLRDLSLEIR DKTELHLL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	3e-57	TCP family protein