PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0046.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26071.5 Da    PI: 8.9205
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0046.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.93.6e-301059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  Kaladp0093s0046.1.p 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59
                         8***********************************************86 PP
2K-box81.22.4e-2778171597
                K-box   5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 
                          s+++   e+++ +l++e+a + k+ie L+  +R+llGe+L+ ++l+eLq+Leqq+e+s+++iR +K+e+++eqie+l++kek+l  en  
  Kaladp0093s0046.1.p  78 SKEKtPPEEDTLHLKTEAASMAKKIELLEAAKRKLLGEGLGACTLEELQKLEQQMERSVTRIRGRKTEVFKEQIERLKEKEKALAAENAI 167
                          333347889999*****************************************************************************9 PP

                K-box  94 Lrkk 97 
                          L +k
  Kaladp0093s0046.1.p 168 LLEK 171
                          9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS  60
SMQQTIERYK RQTKDNQSKE KTPPEEDTLH LKTEAASMAK KIELLEAAKR KLLGEGLGAC  120
TLEELQKLEQ QMERSVTRIR GRKTEVFKEQ IERLKEKEKA LAAENAILLE KCGLQSNPQQ  180
SNQSDEPARE EAQPADNTED SSQISDVETE LFIGPPEKRA KRCSNNGSNN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.18e-73MIKC_MADS family protein