PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0080.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 698aa    MW: 76097.3 Da    PI: 6.1355
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0080.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS319.95.2e-983336962374
                 GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn....sseelaalklfsev 87 
                          ve +++++e ++ g+l laq +Larl+++ sp g+p+qR+a+yf+e L+  l  ++++   + ++  ++ ++    ++ ++ a+k fse+
  Kaladp0093s0080.1.p 333 VEDIFKAVELIQVGNLVLAQGILARLNHQLSPIGKPFQRIAFYFKESLQLLLEMNGNSSNVTTSTALSN-YSpsfgHILKIGAYKSFSEA 421
                          678999*******************************************99987333333222222222.2245679999999******* PP

                 GRAS  88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
                          sP++ f+++t+NqaIle+veg +++H++Dfdi++G+QW++L+q+La R++g+psl+iT+++sp++++  e   + e+L++fA+e++++fe
  Kaladp0093s0080.1.p 422 SPVVHFANFTCNQAILESVEGFDKIHVVDFDIGYGGQWASLMQELALRNGGTPSLKITAFASPSTHDDLEFGLVLENLNQFASEVKLKFE 511
                          ****************************************************************************************** PP

                 GRAS 178 fnvlvakrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyys 265
                           ++    +l++l+   L+v++  gEa++Vnl ++  + +  ++sl+     vL++vk+lsPk+vv  ++ +d+n+ +F ++ ++al+ y+
  Kaladp0093s0080.1.p 512 LRI---GSLDALTSMPLHVSNgeGEAIVVNLPVAALSCY--PMSLPL----VLRVVKQLSPKIVVSLDRGCDRNDLPFPHHTVHALQSYT 592
                          **9...699***********9999*********999998..666666....*************************************** PP

                 GRAS 266 alfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                          al++sl+a++  + ++ +k+Er++++++i+ ++  ++       e+ + Wr+ + ++GF+p+++s+ +++qa++l+++++  g++ve+++
  Kaladp0093s0080.1.p 593 ALLESLDASV-MNLDALQKIERFFIHPSIERMLVSRHLC----PEKISPWRSIFLSSGFSPYQFSNITESQADYLVQRTPAGGFHVEKRQ 677
                          *********7.666999****************999998....9********************************************** PP

                 GRAS 356 gslvlgWkdrpLvsvSaWr 374
                           s+vl+W++++Lvs+SaWr
  Kaladp0093s0080.1.p 678 SSIVLCWQQKELVSASAWR 696
                          ******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MPLPFEIEGK GVLDFEYSDS VHHHPQSELL LAAWTDKQLL EQASSCCHLL GSEPTSVLDA  60
RRSLSLSPSP PNSTSTLSSS LGSSGSGRST AVAGQEKCGV GMDEFENVLS DFGAGVAPPG  120
ATPSPDQSLL GYFFGDHDQV HDPGLVSFNK FMQGSVAPDF DMGTGMSESC STFPLCNNGS  180
VGYGSIPNAI FGQLGSNTVP VAVSQHQHQY QQLMGSFEEK PQVFNPNFAI NQHQIQPSEN  240
PSLFLPMGFG QQEHHGLILP PHPKRLNTGM MLEQGVNNLQ IPKIPFSLQN QHDPGIGHKL  300
QLHSNPPPTR FQTGMTKGRG EEALLGSHQQ AMVEDIFKAV ELIQVGNLVL AQGILARLNH  360
QLSPIGKPFQ RIAFYFKESL QLLLEMNGNS SNVTTSTALS NYSPSFGHIL KIGAYKSFSE  420
ASPVVHFANF TCNQAILESV EGFDKIHVVD FDIGYGGQWA SLMQELALRN GGTPSLKITA  480
FASPSTHDDL EFGLVLENLN QFASEVKLKF ELRIGSLDAL TSMPLHVSNG EGEAIVVNLP  540
VAALSCYPMS LPLVLRVVKQ LSPKIVVSLD RGCDRNDLPF PHHTVHALQS YTALLESLDA  600
SVMNLDALQK IERFFIHPSI ERMLVSRHLC PEKISPWRSI FLSSGFSPYQ FSNITESQAD  660
YLVQRTPAGG FHVEKRQSSI VLCWQQKELV SASAWRC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-126GRAS family protein