PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0097.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 184aa    MW: 21204.3 Da    PI: 6.5127
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0097.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2261.8e-692182192373
                 GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                          e+L+v++gEala n+ lqlh+++desv+++++rd +L++vksl+Pkvv+++eqe+++n+++F++rfle+l+yysa+f+s+++++pr+s+e
  Kaladp0093s0097.1.p   2 EMLDVRSGEALAMNFPLQLHHTPDESVDVNNPRDGLLRMVKSLNPKVVTLIEQESNTNTTPFFNRFLETLDYYSAMFESIDVTMPRDSKE 91 
                          89**************************************************************************************** PP

                 GRAS 282 rikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvS 371
                          ri+vE ++l+r+ vn++aceg+er+erhe l+kW++r+++aGF++ pls+++++ + +ll+ ++ + y++ee++g+++lgWk+r+Lvs+S
  Kaladp0093s0097.1.p  92 RINVEMHCLARDMVNIIACEGKERVERHELLGKWKSRFTMAGFRQFPLSTYVNSVIGSLLKCYS-EHYTLEERDGAMLLGWKRRNLVSAS 180
                          ************************************************************9988.66*********************** PP

                 GRAS 372 aW 373
                          aW
  Kaladp0093s0097.1.p 181 AW 182
                          ** PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MEMLDVRSGE ALAMNFPLQL HHTPDESVDV NNPRDGLLRM VKSLNPKVVT LIEQESNTNT  60
TPFFNRFLET LDYYSAMFES IDVTMPRDSK ERINVEMHCL ARDMVNIIAC EGKERVERHE  120
LLGKWKSRFT MAGFRQFPLS TYVNSVIGSL LKCYSEHYTL EERDGAMLLG WKRRNLVSAS  180
AWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.15e-92GRAS family protein