PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0098.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRAS
Protein Properties Length: 145aa    MW: 16803.3 Da    PI: 8.0721
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0098.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS182.53e-561143230373
                 GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                          +vksl+Pkvv+++eqe+++n+++F++rfle+l+yysa+f+s+++++pr+s+eri+vE ++l+r+ vn++aceg+er+erhe l+kW++r+
  Kaladp0093s0098.1.p   1 MVKSLNPKVVTLIEQESNTNTTPFFNRFLETLDYYSAMFESIDVTMPRDSKERINVEMHCLARDMVNIIACEGKERVERHELLGKWKSRF 90 
                          69**************************************************************************************** PP

                 GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                          ++aGF++ pls+++++ + +ll+ ++ + y++ee++g+++lgWk+r+Lvs+SaW
  Kaladp0093s0098.1.p  91 TMAGFRQFPLSTYVNSVIGSLLKCYS-EHYTLEERDGAMLLGWKRRNLVSASAW 143
                          **********************9988.66************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MVKSLNPKVV TLIEQESNTN TTPFFNRFLE TLDYYSAMFE SIDVTMPRDS KERINVEMHC  60
LARDMVNIIA CEGKERVERH ELLGKWKSRF TMAGFRQFPL STYVNSVIGS LLKCYSEHYT  120
LEERDGAMLL GWKRRNLVSA SAWH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.12e-75GRAS family protein