PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0093s0119.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 366aa MW: 40539.4 Da PI: 8.1829

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0093s0119.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.5	1.5e-54	23	149	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePwdLp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdk Kaladp0093s0119.1.p 23 LPPGFRFHPTDEELITFYLLNKIADASFTG-RAIADVDLNKSEPWDLPSKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDK 111 79***********************999.89***********99999********************************* PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 e++++ + el+g+kktLvfy+grap+gekt+Wvmheyr Kaladp0093s0119.1.p 112 EIFNSaSAELIGMKKTLVFYRGRAPRGEKTNWVMHEYR 149 9867788**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MEGGASGDQV EKNKEAAAAT ETLPPGFRFH PTDEELITFY LLNKIADASF TGRAIADVDL 60 NKSEPWDLPS KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSASAE 120 LIGMKKTLVF YRGRAPRGEK TNWVMHEYRN HSKATFRSAK DEWVVCRVFQ KSAGIKKQYP 180 TQQSSSSRSI TPYNMDMSSN LMQQPMLQQD NTLHYPIGRA ATNYMINSID QLAELTRAFR 240 SNAASATMMN HLPIIPPPHQ QLNHYPNAAA GGAGLFTISG LNLNLGGQQA AASSGMIAQQ 300 DAGVVMMNTE SLNTAANSNY GDLHQGGGYI GLEMSGNDAS QNPNNTRYMN NMDQCMDLDN 360 YWASY*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MEGGASGDQV EKNKEAAAAT ETLPPGFRFH PTDEELITFY LLNKIADASF TGRAIADVDL  60
NKSEPWDLPS KAKMGEKEWY FFSLRDRKYP TGVRTNRATN TGYWKTTGKD KEIFNSASAE  120
LIGMKKTLVF YRGRAPRGEK TNWVMHEYRN HSKATFRSAK DEWVVCRVFQ KSAGIKKQYP  180
TQQSSSSRSI TPYNMDMSSN LMQQPMLQQD NTLHYPIGRA ATNYMINSID QLAELTRAFR  240
SNAASATMMN HLPIIPPPHQ QLNHYPNAAA GGAGLFTISG LNLNLGGQQA AASSGMIAQQ  300
DAGVVMMNTE SLNTAANSNY GDLHQGGGYI GLEMSGNDAS QNPNNTRYMN NMDQCMDLDN  360
YWASY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-111	NAC family protein