PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0127.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family M-type_MADS
Protein Properties Length: 166aa    MW: 18951.1 Da    PI: 10.2791
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0127.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.41.2e-101160351
                         --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T.TSEEEEEE- CS
               SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss.tgklyeyss 51
                         i + s r +tf kR++  +KK +EL  LC+++v+  i  + +gk+  ++s
  Kaladp0093s0127.1.p 11 IPSISARITTFRKRKKSFFKKLNELKKLCEVDVCAFIKNPfDGKMEAWPS 60
                         5667889***************************8887665899998885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MARRGIKLEL IPSISARITT FRKRKKSFFK KLNELKKLCE VDVCAFIKNP FDGKMEAWPS  60
DPEAKSVAER FKNALAAKKK RYGMNQESYL RKNIENFANK LEKQEKKNDD LVFDMMVNGF  120
GIEQAGLDNP EDLRRALGKK IKEVDEKIDH MSIDLNKIPS GSPLS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.14e-14M-type_MADS family protein