PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.10.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 168aa    MW: 18377.8 Da    PI: 9.7166
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.10.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY182.91.7e-56215523169
                 YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl........se 103
                            vsvP ts++++vtvrCGhC++llsvn+    q  ++ +h+ ++ +++  +e    +++++  + ++ s+s+s +s+           +
  Kaladp0093s0154.10.p   2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSSSPSKCNpdklsgscLS 89 
                           69************************99877654.445555666655555554444444444444444444444443323444666545 PP

                 YABBY 104 nedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                           +e+++ pr ppv    ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.10.p  90 SENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 155
                           6777889999976667*************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQQKQQQTG AEGALMTNAT  60
NNLNYSSGSS SSSSPSKCNP DKLSGSCLSS ENNQPPRLPP VRPAMEKRQR VPSAYNRFIK  120
EEIQRIKASN PEISHREAFS AAAKNWAHFP HIHFGMKKAK FLDQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.11e-50YABBY family protein