PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.12.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 187aa    MW: 20502.3 Da    PI: 8.9683
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.12.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY224.23.6e-6941746169
                 YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesast 94 
                            se+vCyv+CnfCnt+l+vsvP ts++++vtvrCGhC++llsvn+    q  ++ +h+ ++ +++  +e    +++++  + ++ s+s+
  Kaladp0093s0154.12.p   4 GSERVCYVHCNFCNTVLVVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSS 91 
                           589****************************************99877654.4455556666555555544444444444444444444 PP

                 YABBY  95 svssekl........senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                           s +s+           ++e+++ pr ppv    ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.12.p  92 SSPSKCNpdklsgscLSSENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 174
                           444433234446665456777889999976667*************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MEVGSERVCY VHCNFCNTVL VVSVPCTSML NIVTVRCGHC ANLLSVNMGA LLQPSSIQHF  60
PQQKQQQTGA EGALMTNATN NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV  120
RPAMEKRQRV PSAYNRFIKE EIQRIKASNP EISHREAFSA AAKNWAHFPH IHFGMKKAKF  180
LDQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.16e-63YABBY family protein