PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 186aa    MW: 20374.2 Da    PI: 8.9683
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY223.46.5e-6941736169
                YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekees 91 
                           se+vCyv+CnfCnt+l+vsvP ts++++vtvrCGhC++llsvn+    q  +  +h+ ++ +++     l ++ +++ n++s  ++++s
  Kaladp0093s0154.3.p   4 GSERVCYVHCNFCNTVLVVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQPSSI-QHFPQKQQQTgaegALMTNATNNLNYSSGSSSSSS 92 
                          589***************************************999887755444.44443333331112333333333333333333333 PP

                YABBY  92 astsvssekl....senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                          +s+ ++  kl     ++e+++ pr ppv    ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.3.p  93 PSKCNPD-KLsgscLSSENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 173
                          3333333.335555456677889999976667*************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEVGSERVCY VHCNFCNTVL VVSVPCTSML NIVTVRCGHC ANLLSVNMGA LLQPSSIQHF  60
PQKQQQTGAE GALMTNATNN LNYSSGSSSS SSPSKCNPDK LSGSCLSSEN NQPPRLPPVR  120
PAMEKRQRVP SAYNRFIKEE IQRIKASNPE ISHREAFSAA AKNWAHFPHI HFGMKKAKFL  180
DQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.13e-62YABBY family protein