PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.4.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 149aa    MW: 16347.6 Da    PI: 9.7
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.4.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY168.16.1e-52213723170
                YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprv 112
                           vsvP ts++++vtvrCGhC++llsvn+    q  ++ +h+ ++ +++  +e    +++++  + ++ s+s+s +s        +     
  Kaladp0093s0154.4.p   2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSSSPS--------KC---N 79 
                          69***********************998766554.34444333333222222222222222222222222222222........11...2 PP

                YABBY 113 ppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                          p+     ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg+
  Kaladp0093s0154.4.p  80 PDKLSAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFGM 137
                          33455679************************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQQKQQQTG AEGALMTNAT  60
NNLNYSSGSS SSSSPSKCNP DKLSAMEKRQ RVPSAYNRFI KEEIQRIKAS NPEISHREAF  120
SAAAKNWAHF PHIHFGMKKA KFLDQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.17e-47YABBY family protein