PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.5.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 167aa    MW: 18249.7 Da    PI: 9.7166
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.5.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY182.13.2e-56215423169
                YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekeesastsvssekl....sen 104
                           vsvP ts++++vtvrCGhC++llsvn+    q  +  +h+ ++ +++     l ++ +++ n++s  ++++s+s+ ++  kl     ++
  Kaladp0093s0154.5.p   2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQPSSI-QHFPQKQQQTgaegALMTNATNNLNYSSGSSSSSSPSKCNPD-KLsgscLSS 89 
                          69***********************999887755444.444433333311123333333333333333333333333333.335555456 PP

                YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                          e+++ pr ppv    ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.5.p  90 ENNQPPRLPPVRPAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 154
                          677889999976667*************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQKQQQTGA EGALMTNATN  60
NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV RPAMEKRQRV PSAYNRFIKE  120
EIQRIKASNP EISHREAFSA AAKNWAHFPH IHFGMKKAKF LDQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.14e-50YABBY family protein