PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.6.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 167aa    MW: 18306.8 Da    PI: 9.7166
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.6.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY186.71.2e-57215423169
                YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekl........sen 104
                           vsvP ts++++vtvrCGhC++llsvn+    q  ++ +h+ ++ +++  +e    +++++  + ++ s+s+s +s+           ++
  Kaladp0093s0154.6.p   2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSSSPSKCNpdklsgscLSS 90 
                          69************************99877654.4455556666555555544444444444444444444444433234446665456 PP

                YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                          e+++ pr pp +rP ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.6.p  91 ENNQPPRLPP-VRPMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 154
                          6677788888.9****************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQQKQQQTG AEGALMTNAT  60
NNLNYSSGSS SSSSPSKCNP DKLSGSCLSS ENNQPPRLPP VRPMEKRQRV PSAYNRFIKE  120
EIQRIKASNP EISHREAFSA AAKNWAHFPH IHFGMKKAKF LDQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.13e-52YABBY family protein