PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0154.7.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family YABBY
Protein Properties Length: 166aa    MW: 18178.6 Da    PI: 9.7166
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0154.7.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY185.92.1e-57215323169
                YABBY  23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekeesastsvssekl....sen 104
                           vsvP ts++++vtvrCGhC++llsvn+    q  +  +h+ ++ +++     l ++ +++ n++s  ++++s+s+ ++  kl     ++
  Kaladp0093s0154.7.p   2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQPSSI-QHFPQKQQQTgaegALMTNATNNLNYSSGSSSSSSPSKCNPD-KLsgscLSS 89 
                          69***********************999887755444.444433333311123333333333333333333333333333.335554455 PP

                YABBY 105 edeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                          e+++ pr pp +rP ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg
  Kaladp0093s0154.7.p  90 ENNQPPRLPP-VRPMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFG 153
                          6677788888.9****************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQKQQQTGA EGALMTNATN  60
NLNYSSGSSS SSSPSKCNPD KLSGSCLSSE NNQPPRLPPV RPMEKRQRVP SAYNRFIKEE  120
IQRIKASNPE ISHREAFSAA AKNWAHFPHI HFGMKKAKFL DQDIN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.11e-51YABBY family protein