PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0094s0011.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 240aa    MW: 27259 Da    PI: 9.3488
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0094s0011.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.35.4e-30959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl++y++
  Kaladp0094s0011.1.p  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFDYAT 59
                         79***********************************************86 PP
2K-box99.93.5e-33811747100
                K-box   7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                            ++++ + s++ e+a+Lk++ie L+++qRh++GedL+sL lkeLq+Le+qL+++lk+iR+kK++l++e+i+elqkk k+l+e+n++L k
  Kaladp0094s0011.1.p  81 IPTDTESNGSWHLEHARLKARIEALEQKQRHYMGEDLDSLILKELQNLENQLDSALKHIRAKKSQLMFESISELQKKDKQLHEQNTSLAK 170
                          4466777899******************************************************************************** PP

                K-box  97 klee 100
                          +++e
  Kaladp0094s0011.1.p 171 QMKE 174
                          9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MGRGRVQMKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFDYATD  60
SCMDRILERH ERYSSAEKQL IPTDTESNGS WHLEHARLKA RIEALEQKQR HYMGEDLDSL  120
ILKELQNLEN QLDSALKHIR AKKSQLMFES ISELQKKDKQ LHEQNTSLAK QMKERENTQG  180
MDQQSHIQPP LEASTGIGGG NYIYQGARDH GGTASSALHL TTTTTTLLPQ WMLMSRLGE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.18e-93MIKC_MADS family protein