PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0014.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 230aa    MW: 25888.5 Da    PI: 6.2935
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0014.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.64.5e-25959151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+i+n++ rqvtfskRr g++KKAeEL vLCd +v +++fsstgk +eys+
  Kaladp0095s0014.2.p  9 KKIDNTTARQVTFSKRRRGLFKKAEELAVLCDSDVGLVVFSSTGKCFEYSN 59
                         68***********************************************95 PP
2K-box41.65.2e-15951742099
                K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          +++kL +e+ +  + +R++ Ge+Le + +++LqqLe+ Le +l++i ++K   ++++i el +k  +l een+ Lr++++
  Kaladp0095s0014.2.p  95 NYTKLGQEVAEKSSLLRRYRGENLEGMGIEDLQQLEKCLEAGLSRIIETKGGKIMREICELENKGMRLMEENEVLRQQVA 174
                          6788888888888999*************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELAVLCD SDVGLVVFSS TGKCFEYSNC  60
GMQQILERHH LQSKNLEKLQ QPAPSLELQL VEDVNYTKLG QEVAEKSSLL RRYRGENLEG  120
MGIEDLQQLE KCLEAGLSRI IETKGGKIMR EICELENKGM RLMEENEVLR QQVARIPNVY  180
IPHRANSENR MCEDGQSSES VTNLCISGGA SQDYESSDIS LRLGLPYSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.19e-99MIKC_MADS family protein