PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0014.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 255aa    MW: 28932 Da    PI: 7.7486
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0014.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF78.35.3e-253484151
                         S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         k+i+n++ rqvtfskRr g++KKAeEL vLCd +v +++fsstgk +eys+
  Kaladp0095s0014.3.p 34 KKIDNTTARQVTFSKRRRGLFKKAEELAVLCDSDVGLVVFSSTGKCFEYSN 84
                         68***********************************************95 PP
2K-box41.17.6e-151201992099
                K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                          +++kL +e+ +  + +R++ Ge+Le + +++LqqLe+ Le +l++i ++K   ++++i el +k  +l een+ Lr++++
  Kaladp0095s0014.3.p 120 NYTKLGQEVAEKSSLLRRYRGENLEGMGIEDLQQLEKCLEAGLSRIIETKGGKIMREICELENKGMRLMEENEVLRQQVA 199
                          6788888888888999*************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSVNSKDFFK KNVPHRLERE KRVSEMAREK IQIKKIDNTT ARQVTFSKRR RGLFKKAEEL  60
AVLCDSDVGL VVFSSTGKCF EYSNCGMQQI LERHHLQSKN LEKLQQPAPS LELQLVEDVN  120
YTKLGQEVAE KSSLLRRYRG ENLEGMGIED LQQLEKCLEA GLSRIIETKG GKIMREICEL  180
ENKGMRLMEE NEVLRQQVAR IPNVYIPHRA NSENRMCEDG QSSESVTNLC ISGGASQDYE  240
SSDISLRLGL PYSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-98MIKC_MADS family protein