PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0079.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NF-YB
Protein Properties Length: 208aa    MW: 23418 Da    PI: 5.9456
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0079.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.23.7e-5630125297
                NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyr 91 
                          +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++tlGfedyv plkvyl+kyr
  Kaladp0095s0079.1.p  30 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVVPLKVYLNKYR 119
                          89**************************************************************************************** PP

                NF-YB  92 elegek 97 
                          e+eg+k
  Kaladp0095s0079.1.p 120 EIEGDK 125
                          ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MENESHGSWP SGGIQDDFSP AKKGSNSNNK EQDRFLPIAN VGRIMKKVIP GNGKISKDAK  60
ETVQECVSEF ISFVTGEASD KCQREKRKTI NGDDVIWAIT TLGFEDYVVP LKVYLNKYRE  120
IEGDKLNVPN KQRPDQESQQ QQLNEQNTAT SLPYIDHPHP HSVYSSSNFI TPQTFLTADQ  180
QFPLPFSPTS VQKQIQQEQH IDSVGHW*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G13570.11e-68NF-YB family protein