PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0107.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 241aa    MW: 27324.3 Da    PI: 7.021
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0107.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY84.69.1e-27118176159
                          ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                          ldDgy+WrKYG+K+vk++++ r+YY+Ct +gC+vkk ver  ed ++v++ Y g H+he
  Kaladp0095s0107.1.p 118 LDDGYRWRKYGKKHVKNNPNLRNYYKCTAEGCQVKKIVERWVEDSSYVITQYVGVHTHE 176
                          59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MDLYSLQNPN PNFDLYTDDC SLDQFDFLLE GLSNYQTDDG FCGVFGESLL SYSTSPPAVT  60
SPPEKVSNCG HDALLLVSGG ASGSAMNVMQ NNEGRKTKRD AYRPQRVAFK TKSRLDVLDD  120
GYRWRKYGKK HVKNNPNLRN YYKCTAEGCQ VKKIVERWVE DSSYVITQYV GVHTHESPSA  180
YYFSNYNNHH YHHHHGISAT DHLSSLSQCC KFLDSISSME KVHHTAHEKI ETSYIVNNFN  240
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195133RKTKRDAYRPQRVAFKTKSRLDVLDDGYRWRKYGKKHVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-38WRKY family protein