PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0189.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

TCP

Protein Properties

Length: 372aa MW: 41140.5 Da PI: 7.3812

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0189.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	103.3	4.1e-32	52	160	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg. 88 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak i+el+ ++ ++ ++ +a++ s+s s + Kaladp0095s0189.1.p 52 FGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDDIDELPPLQIPPGFNFidQAHQAMLSSS--SYAa 139 689*************************************************************88888666443333333333..2222 PP TCP 89 kaaksaakskksqksaasaln 109 +++ a++++++q+++ s+ n Kaladp0095s0189.1.p 140 NQQVVATTPRSDQDQPGSKIN 160 333333344444444443333 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MIPRTRDGED FSDKLDNNDA NGGPSTHKAD STSSTAWLRS KDPRIVRVSR AFGGKDRHSK 60 VCTIRGLRDR RVRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLNVAKDDID ELPPLQIPPG 120 FNFIDQAHQA MLSSSSYAAN QQVVATTPRS DQDQPGSKIN ASWEDAPVDL HKSSFWTGSS 180 QPRSAKSSKH VATREIIMNE KPEIWTKRMM SDDHQADDHK LETLELGHGG GGGMQMGSSS 240 YNNFFTRATT SNHSSLPNLL HSVLPYGSYY HFDYPSNFSL SSSSSQSDNH PHPHQSNYNV 300 VPTGPHVLVC PPGMAASQSY FPATTTSSAS AAPMELDPRQ FINHFQILSP TQQQHHQSSL 360 HMSLDDVNKK R*

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MIPRTRDGED FSDKLDNNDA NGGPSTHKAD STSSTAWLRS KDPRIVRVSR AFGGKDRHSK  60
VCTIRGLRDR RVRLSVPTAI QLYDLQDRLG LNQPSKVVDW LLNVAKDDID ELPPLQIPPG  120
FNFIDQAHQA MLSSSSYAAN QQVVATTPRS DQDQPGSKIN ASWEDAPVDL HKSSFWTGSS  180
QPRSAKSSKH VATREIIMNE KPEIWTKRMM SDDHQADDHK LETLELGHGG GGGMQMGSSS  240
YNNFFTRATT SNHSSLPNLL HSVLPYGSYY HFDYPSNFSL SSSSSQSDNH PHPHQSNYNV  300
VPTGPHVLVC PPGMAASQSY FPATTTSSAS AAPMELDPRQ FINHFQILSP TQQQHHQSSL  360
HMSLDDVNKK R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	3e-48	TCP family protein