PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0223.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 285aa    MW: 32327 Da    PI: 6.1817
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0223.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox597.7e-1977129456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          + ++++eq++eLe+ Fe  ++++ e++ +LAk+lgL+ rqV +WFqNrRa++k
  Kaladp0095s0223.1.p  77 KKRLKREQVRELERSFELGNKLDPERKLQLAKSLGLQPRQVAIWFQNRRARWK 129
                          44589***********************************************9 PP
2HD-ZIP_I/II119.51.8e-3875165191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          e+k+rl++eqv+ LE+sFe  +kL+perK +la++Lglqprqva+WFqnrRAR+ktkqlEkdy  Lk+++ + +++n++L++++++Lr+e
  Kaladp0095s0223.1.p  75 ERKKRLKREQVRELERSFELGNKLDPERKLQLAKSLGLQPRQVAIWFQNRRARWKTKQLEKDYGLLKKQFASAVADNDKLQSQNKQLRQE 164
                          69**************************************************************************************87 PP

          HD-ZIP_I/II  91 l 91 
                           
  Kaladp0095s0223.1.p 165 F 165
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MSFFPHDFFF HPSNNEDQDH QGGMMFLKRS VSFTEMNAGF EEEEEDGVGN NQEDELSDEC  60
GGGGGGGGSG LGGGERKKRL KREQVRELER SFELGNKLDP ERKLQLAKSL GLQPRQVAIW  120
FQNRRARWKT KQLEKDYGLL KKQFASAVAD NDKLQSQNKQ LRQEFLKLQA LRSKDSVLEG  180
TASIKKEVPY HRTYSWSNNA SENSYEMNLL DSTRTPMISM NLFPSSFNRP ATISHLLETS  240
LRSDPQPSRI NQVVPDESLC NILCSMDDPT TGMWSWGEQH HFGQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17683RKKRLKRE
2124132RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.11e-52HD-ZIP family protein