PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0223.2.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 262aa    MW: 29607.2 Da    PI: 6.9424
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0223.2.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.26.7e-1954106456
                          -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
             Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                          + ++++eq++eLe+ Fe  ++++ e++ +LAk+lgL+ rqV +WFqNrRa++k
  Kaladp0095s0223.2.p  54 KKRLKREQVRELERSFELGNKLDPERKLQLAKSLGLQPRQVAIWFQNRRARWK 106
                          44589***********************************************9 PP
2HD-ZIP_I/II119.71.5e-3852142191
          HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                          e+k+rl++eqv+ LE+sFe  +kL+perK +la++Lglqprqva+WFqnrRAR+ktkqlEkdy  Lk+++ + +++n++L++++++Lr+e
  Kaladp0095s0223.2.p  52 ERKKRLKREQVRELERSFELGNKLDPERKLQLAKSLGLQPRQVAIWFQNRRARWKTKQLEKDYGLLKKQFASAVADNDKLQSQNKQLRQE 141
                          69**************************************************************************************87 PP

          HD-ZIP_I/II  91 l 91 
                           
  Kaladp0095s0223.2.p 142 F 142
                          5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MMFLKRSVSF TEMNAGFEEE EEDGVGNNQE DELSDECGGG GGGGGSGLGG GERKKRLKRE  60
QVRELERSFE LGNKLDPERK LQLAKSLGLQ PRQVAIWFQN RRARWKTKQL EKDYGLLKKQ  120
FASAVADNDK LQSQNKQLRQ EFLKLQALRS KDSVLEGTAS IKKEVPYHRT YSWSNNASEN  180
SYEMNLLDST RTPMISMNLF PSSFNRPATI SHLLETSLRS DPQPSRINQV VPDESLCNIL  240
CSMDDPTTGM WSWGEQHHFG Q*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15360RKKRLKRE
2101109RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.14e-52HD-ZIP family protein