PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0229.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

AP2

Protein Properties

Length: 395aa MW: 44237.3 Da PI: 9.2367

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0229.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	37.2	7.4e-12	76	132	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g Kaladp0095s0229.1.p 76 SRFRGVSRHRWTGRYEAHLWDkLSWNVtqKKKGKQ-GAYDEEESAARAYDLAALKYWG 132 789****************88887784446666.9*****************98 PP
2	AP2	51.2	3.1e-16	175	226	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g Kaladp0095s0229.1.p 175 SRYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 226 79**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MMDPVEMMMV KSEENTGRRG MRVMDGNTAT RCVKRRRRDP PLVAAVSVTS DEAEQKQPRV 60 DGAAPAATAT TVKRSSRFRG VSRHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDEEESAA 120 RAYDLAALKY WGPTTYTNFP IADYESEIEI MQTMTKEEYL ASLRRKSSGF SRGVSRYRGV 180 ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSSYIR 240 WLKPSGSTTP SAAMEQQTGM GTSHSQTIMS STSANFTRDD SETLLFKTNP FSVSDYLSRP 300 TKQESFHGNF ELGNKSSMPS SPSALGVLLR SSVFKELVAK NSTVSEDDAD ASDTKFPTQV 360 SADDFGGLFF GGELPFAFSR DGIELHEREF QFVF*

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MMDPVEMMMV KSEENTGRRG MRVMDGNTAT RCVKRRRRDP PLVAAVSVTS DEAEQKQPRV  60
DGAAPAATAT TVKRSSRFRG VSRHRWTGRY EAHLWDKLSW NVTQKKKGKQ GAYDEEESAA  120
RAYDLAALKY WGPTTYTNFP IADYESEIEI MQTMTKEEYL ASLRRKSSGF SRGVSRYRGV  180
ARHHHNGRWE ARIGRVFGNK YLYLGTYSTQ EEAARAYDIA AIEYRGINAV TNFDLSSYIR  240
WLKPSGSTTP SAAMEQQTGM GTSHSQTIMS STSANFTRDD SETLLFKTNP FSVSDYLSRP  300
TKQESFHGNF ELGNKSSMPS SPSALGVLLR SSVFKELVAK NSTVSEDDAD ASDTKFPTQV  360
SADDFGGLFF GGELPFAFSR DGIELHEREF QFVF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	1e-90	AP2 family protein