PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0245.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C2H2
Protein Properties Length: 298aa    MW: 33432.8 Da    PI: 8.2678
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0245.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.40.001527123
                         EEETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                         ++C++C++ F +  ++  H+r+H
  Kaladp0095s0245.1.p  5 HSCKICNRKFANGKSMGGHMRSH 27
                         79*******************99 PP
2zf-C2H214.40.00011197218223
                          EETTTTEEESSHHHHHHHHHHT CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                          +C+ C+k+F++   L  H+r+H
  Kaladp0095s0245.1.p 197 RCQMCKKVFKNYQALGGHMRNH 218
                          6********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MELKHSCKIC NRKFANGKSM GGHMRSHFAK LPILSSSSAS RQPESLNARA PVTCLSSSYD  60
PLSQKLDYGC GGYQAKNATS ANRISAMAAL RVRASSRKRS KRIPRFIKKE SKPISAPPLD  120
PRYGEFTSPE TLVFVEDAAR CLMKLSKDKW PENDERLHGN HFPYFVETHS EDDTLSDEEE  180
DEEGDLSEPV EEIFGRRCQM CKKVFKNYQA LGGHMRNHRR PPVARPVPVV EKRVFQCEIC  240
LKVFGSGQAL GGHKKVHLFM DKKNVIENDL PIFENDPDSD CEFRSESTSA SETSSDT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-19C2H2 family protein