PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0266.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family C3H
Protein Properties Length: 428aa    MW: 46667 Da    PI: 7.7417
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0266.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH30.85.2e-10101125126
                          --S---SGGGGTS--TTTTT-SS-SS CS
              zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                          +kt+lC+f+++ G C +G++C++ H+
  Kaladp0095s0266.1.p 101 KKTKLCNFWSQ-GNCTFGEKCRYLHS 125
                          59*********.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MDLDGGKRVF QRLGGGGSDA GDKQQKVCFH WRAGRCNRHP CPFLHRELPE PAARSSNGGL  60
SSRRPHDDSG GGFSGPRQKA HSFNSASSWG RNNNRAAVPP KKTKLCNFWS QGNCTFGEKC  120
RYLHSWSLGE SFTFLTQLDG HKKVATAIAW PAGSDKLFTG SKDETVMIWD CQSGKCENVA  180
NLGGEIGCMI SEGPWIFVGL PNFVKALNTV TSSDQSLAGP VGQVYALVVG YDMLIAGTQE  240
GTILAWRFNT VTNCFEPAAS LKGHNLAVVT LVVAANRLYS GSMDNTIRVW NLDSLQCIQT  300
LTEHTSVVMS VLCWEQFLIS CSLDKTVKIW VATESGNLEV TYTHTEEYGI LTLCGMTDAE  360
AKPVLLCSCN DNTVRFYDLP SFTDRGKIFS KEEIRTIQLG PAGLFFTGDG AGQVKIWKWL  420
DKPVPAA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein