PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0388.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family LBD
Protein Properties Length: 217aa    MW: 23428.7 Da    PI: 5.0128
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0388.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.59.7e-43361351100
               DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                          +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe +r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l
  Kaladp0095s0388.1.p  36 PCAACKILRRRCADKCVLAPYFPPTEPHKFTIAHRVFGASNIIKFLQELPEAQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSEL 125
                          7***************************************************************************************** PP

               DUF260  91 kaelallkee 100
                          +a+la+ ++e
  Kaladp0095s0388.1.p 126 QAQLAKSQAE 135
                          *****99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MEHRERTSTT PSPTSSLTSS PPSSPSQATT TVIMSPCAAC KILRRRCADK CVLAPYFPPT  60
EPHKFTIAHR VFGASNIIKF LQELPEAQRA DAVSSMVYEA SARIRDPVYG CAGAICQLQK  120
QVSELQAQLA KSQAEIVNMQ AQQAQLVALI CMEMSSVQPS KTTVKTAPDQ SFDCEGFIGS  180
PLVDDFYGGL GFEIESDGMG SLGWETPLWP DVMMTS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.14e-74LBD family protein