PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0414.3.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MIKC_MADS
Protein Properties Length: 228aa    MW: 25955.5 Da    PI: 9.1255
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0414.3.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF80.21.4e-251059251
                         ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
               SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                         ri+n + rqvtfskRrng+lKKA+EL +LCdaev v++fsstgk+++++s
  Kaladp0095s0414.3.p 10 RIDNPTSRQVTFSKRRNGLLKKANELAILCDAEVGVMVFSSTGKVHDFAS 59
                         8***********************************************86 PP
2K-box74.23.6e-2578169898
                K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 
                          +  ++++ + +q+e+a L++++++Lq+++R+l+ +dL+ L +k+Lq Le++L+ksl++iR++K++ll+++i el  k + +++en +L +
  Kaladp0095s0414.3.p  78 QlDSSSEIKFWQREAATLRQQLQSLQESHRQLMRDDLSGLGIKDLQDLETHLDKSLRSIRTTKDKLLMDEILELNAKGNIVRQENLELYQ 167
                          24688999********************************************************************************99 PP

                K-box  97 kl 98 
                          k+
  Kaladp0095s0414.3.p 168 KV 169
                          96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MGRGKVVIRR IDNPTSRQVT FSKRRNGLLK KANELAILCD AEVGVMVFSS TGKVHDFASS  60
SMTSVIDRYS KSKEEQQQLD SSSEIKFWQR EAATLRQQLQ SLQESHRQLM RDDLSGLGIK  120
DLQDLETHLD KSLRSIRTTK DKLLMDEILE LNAKGNIVRQ ENLELYQKVY GTKDVHAQCS  180
SITPISRHDL NIGEDAHVPV ELQLCQPQNQ NYETRTRATK LGRLYLQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.13e-82MIKC_MADS family protein