PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0509.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HD-ZIP
Protein Properties Length: 851aa    MW: 93478.7 Da    PI: 5.7261
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0509.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.7e-182886357
                         --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
             Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                         k  ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Kaladp0095s0509.1.p 28 KYVRYTPEQVEALERVYHECPKPSSIRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 86
                         5679*****************************************************97 PP
2START172.33.2e-541733812205
                          HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..E CS
                START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..g 89 
                          +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v  +++  v+++l+d++ W + ++ +++l+v s++  g
  Kaladp0095s0509.1.p 173 IAEETLTEFLSKATGTAVEWVQLPGMKPGPDSIGIIAISHSCVGVAARACGLVSLDPP-RVADILKDRPSWYRECRTVDVLNVMSTAngG 261
                          789*******************************************************.9999999999*****************999* PP

                          EEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
                START  90 alqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                          +++l +++l+a+++l++ Rdf+ +R++  +++g++vi+++S++++q+ p+     ++vRae+lpSg+li+p+++g+s +++v+h+dl+++
  Kaladp0095s0509.1.p 262 TIELLYMQLYAPTTLAAaRDFWLLRFTSVMEDGSLVICERSLNHTQNGPSmppVNHFVRAEMLPSGYLIRPCEGGGSIIHVVDHMDLEAS 351
                          ************************************************99888899********************************** PP

                          XXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                START 176 lphwllrslvksglaegaktwvatlqrqce 205
                          +++++lr+l++s++  ++kt++a+l+++++
  Kaladp0095s0509.1.p 352 SVPEVLRPLYESSALLAQKTTMAALRQLRQ 381
                          **************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MGNHNQGELE VMMSMNSGGS KMGMDNGKYV RYTPEQVEAL ERVYHECPKP SSIRRQQLIR  60
ECPILSNIEP KQIKVWFQNR RCREKQRKES SRLQAVNRKL TAMNKLLMEE NDRLQKQVSQ  120
LVYENGYFRQ QTQNTTVAAT DTSCESVVTS GQQQLVPFQH PPRDASPAGL LSIAEETLTE  180
FLSKATGTAV EWVQLPGMKP GPDSIGIIAI SHSCVGVAAR ACGLVSLDPP RVADILKDRP  240
SWYRECRTVD VLNVMSTANG GTIELLYMQL YAPTTLAAAR DFWLLRFTSV MEDGSLVICE  300
RSLNHTQNGP SMPPVNHFVR AEMLPSGYLI RPCEGGGSII HVVDHMDLEA SSVPEVLRPL  360
YESSALLAQK TTMAALRQLR QISQEISQPA ISSWGRRPAA LRALSQRLNR GFNEAVNGFT  420
DEGWSVVETD GMDDVTILVN SSPSKLVGTN LFYATGLPSS SNAVLCAKAS MLLQDVPPAL  480
LIRFLREHRS EWADSSIDAY SASAIRPGAC GLPETRVGNY GSQIILPLAH TIENEEFMEV  540
IKLENFGHYQ DDMIMPGDIF LLQLCNGIDE TATGTSAELI FAPMDASFSD DAPLLPSGFR  600
IIPLGSGSDP SSPNRTLDLA SALEAGSVGS RVAGDISSQG GKTKSVMTIA FQFAFDLHMQ  660
DNVTAMARQY VRSIVSSVQR VALALSPSGF NTHPTICRPP GTPEAHTLAS WICHSYRSFL  720
GVDLLKPNTD GSEHILKSLW HHSDAVLCCS LKALPVFTFA NQAGMDMLET TFAALQDITL  780
EKIFDENGRK TLCTEFPQIM QLGFMSLQGG ICLSSMGRPV SYERAVAWKV LDEDENAHCI  840
CFMFISWSFV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein