PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0538.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 211aa MW: 23640.7 Da PI: 9.9018

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0538.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57	4.5e-18	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l+++++ G+++Wk++a + g+ R++k+c++rw +yl Kaladp0095s0538.1.p 17 RGAWTPEEDRRLAQVIETQGPRRWKSVAVKAGLSRCGKSCRLRWMNYL 64 89********************************************97 PP
2	Myb_DNA-binding	51.1	3.1e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l Kaladp0095s0538.1.p 70 RGNISAQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 115 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MRSLKPGAAA TSMAGNRGAW TPEEDRRLAQ VIETQGPRRW KSVAVKAGLS RCGKSCRLRW 60 MNYLRPNIKR GNISAQEEDL ILRLHKLLGN RWSLIAGRLP GRTDNEIKNY WNSHLSKKAK 120 QCQANNKHAS STDGAGNVEG TRQSASKSTV IVKHNESMMC NNEAASCSNN AKLRMEEQKQ 180 CEEDGGLSME WVSQLLVDID DQSWFLNYYT *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	8e-54	MYB family protein