PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0553.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 358aa MW: 39933.1 Da PI: 5.7004

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0553.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180	6.1e-56	18	144	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtdeel+++yL++k+ + ++ + +i e+d++k+ePwdLp+k+k +e+ewyfF+ rdkky+tg r+nrat++gyWkatgkdk Kaladp0095s0553.1.p 18 LPPGFRFHPTDEELITHYLRHKIVDASFVA-VAIGEADLNKCEPWDLPAKAKMGENEWYFFCLRDKKYPTGLRTNRATEAGYWKATGKDK 106 79***********************888.67***********99999********************************* PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 e+++ +++lvg+kktLvfy+grapkg k++Wvmheyrle Kaladp0095s0553.1.p 107 EIFR-GKSLVGMKKTLVFYRGRAPKGDKSNWVMHEYRLE 144 .999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MDQSMLVIKD QDDQQIDLPP GFRFHPTDEE LITHYLRHKI VDASFVAVAI GEADLNKCEP 60 WDLPAKAKMG ENEWYFFCLR DKKYPTGLRT NRATEAGYWK ATGKDKEIFR GKSLVGMKKT 120 LVFYRGRAPK GDKSNWVMHE YRLEGKLSFH NLPQTAKTEW VISRVFEKSC SGKKMHVPGL 180 VPSLSCLENF MAQSELPPLM DFSQFDTKLN NIASSNNVSC FSSQTAFPRA APPPQPDLII 240 GSNQLYAISG NQPFSNPNQM FIPGNFQFPG SLPDQDEALM RGYLDSINSS DGGWLLNSGR 300 EMVSVSQETG LTSDVNVNMN SNEISSVMSN NVGARRPFED GSTSGAGPVD LDYLWPY*

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MDQSMLVIKD QDDQQIDLPP GFRFHPTDEE LITHYLRHKI VDASFVAVAI GEADLNKCEP  60
WDLPAKAKMG ENEWYFFCLR DKKYPTGLRT NRATEAGYWK ATGKDKEIFR GKSLVGMKKT  120
LVFYRGRAPK GDKSNWVMHE YRLEGKLSFH NLPQTAKTEW VISRVFEKSC SGKKMHVPGL  180
VPSLSCLENF MAQSELPPLM DFSQFDTKLN NIASSNNVSC FSSQTAFPRA APPPQPDLII  240
GSNQLYAISG NQPFSNPNQM FIPGNFQFPG SLPDQDEALM RGYLDSINSS DGGWLLNSGR  300
EMVSVSQETG LTSDVNVNMN SNEISSVMSN NVGARRPFED GSTSGAGPVD LDYLWPY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-111	NAC family protein