PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0568.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 364aa MW: 40299.9 Da PI: 7.3254

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0568.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.1	7.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++ +G+g+W++++ g+ R+ k+c++rw +yl Kaladp0095s0568.1.p 14 KGPWTPEEDIILVSYIQDHGPGNWRSVPTNTGLLRCSKSCRLRWTNYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	49	1.4e-15	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T +E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l Kaladp0095s0568.1.p 67 RGNFTDQEEKMIIHLQALLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MGRPPCCDKL GVKKGPWTPE EDIILVSYIQ DHGPGNWRSV PTNTGLLRCS KSCRLRWTNY 60 LRPGIRRGNF TDQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ 120 SGTNDSSQDD NSSSSSASRH TAPKGQWERR LQTDIHLAKQ ALCEALSLDK PIYETADKSH 180 SPHQPASNSN NLNLLLTPTP TSIMGVTQSP SMPATTTYAS NAENIARLLE NWSKKKSSSF 240 GSASNQMTII NSGAVSQNYS LKSQEHQQHV GSSSCSEGTL SSTTPDQFES IFDNSNNVTL 300 HHDSTLMYQA ESKPLNMEDQ APQMPLTLLE KWLLFDDGTN NGITSQGQDG LLDMSLDGNS 360 VFF*

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MGRPPCCDKL GVKKGPWTPE EDIILVSYIQ DHGPGNWRSV PTNTGLLRCS KSCRLRWTNY  60
LRPGIRRGNF TDQEEKMIIH LQALLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKLKKLQ  120
SGTNDSSQDD NSSSSSASRH TAPKGQWERR LQTDIHLAKQ ALCEALSLDK PIYETADKSH  180
SPHQPASNSN NLNLLLTPTP TSIMGVTQSP SMPATTTYAS NAENIARLLE NWSKKKSSSF  240
GSASNQMTII NSGAVSQNYS LKSQEHQQHV GSSSCSEGTL SSTTPDQFES IFDNSNNVTL  300
HHDSTLMYQA ESKPLNMEDQ APQMPLTLLE KWLLFDDGTN NGITSQGQDG LLDMSLDGNS  360
VFF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47600.1	1e-100	MYB family protein