PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0095s0599.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 353aa MW: 38928.6 Da PI: 6.054

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0095s0599.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.4	5.2e-16	15	66	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqkyl 48 rg W++eEd + +v ++G+g+W++++++ ++R++k+c++rw++yl Kaladp0095s0599.1.p 15 RGVWSPEEDAKMMAYVSKYGTGNWTAVPKKAAsgagLRRCGKSCRLRWNNYL 66 899************************************************7 PP
2	Myb_DNA-binding	45.2	2.1e-14	74	115	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T++E+el+++++ G++ W+ Ia+ ++ gRt++++k++w++ Kaladp0095s0599.1.p 74 SFTPQEEELIIKLHGAIGTR-WSIIAQQLP-GRTDNDVKNYWNS 115 79****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MMAQSTCCEK MSVKRGVWSP EEDAKMMAYV SKYGTGNWTA VPKKAASGAG LRRCGKSCRL 60 RWNNYLRPDL KHDSFTPQEE ELIIKLHGAI GTRWSIIAQQ LPGRTDNDVK NYWNSKLRKK 120 LQDMGIDPVT HKPYSQILAD YGSIGGLRKF GHSLNKDLKN AFTQIEGNPE EQIVHFSCRD 180 GQVRGAQSHQ NVHESTDLLD QLQAIKKFTE AAPGSKNIET AVTASPQWGY GHPTLSPTSS 240 SSSSACSAGN TSSSLQGLNW QDYLLDDVFV PSEENMAEYF MCGDTDGSRK IEGPEPTQAL 300 SQSKNIVMDN HGTGATVIRA SDASFLDEML AKENEMMLLE FPSLLEDSTF ES*

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MMAQSTCCEK MSVKRGVWSP EEDAKMMAYV SKYGTGNWTA VPKKAASGAG LRRCGKSCRL  60
RWNNYLRPDL KHDSFTPQEE ELIIKLHGAI GTRWSIIAQQ LPGRTDNDVK NYWNSKLRKK  120
LQDMGIDPVT HKPYSQILAD YGSIGGLRKF GHSLNKDLKN AFTQIEGNPE EQIVHFSCRD  180
GQVRGAQSHQ NVHESTDLLD QLQAIKKFTE AAPGSKNIET AVTASPQWGY GHPTLSPTSS  240
SSSSACSAGN TSSSLQGLNW QDYLLDDVFV PSEENMAEYF MCGDTDGSRK IEGPEPTQAL  300
SQSKNIVMDN HGTGATVIRA SDASFLDEML AKENEMMLLE FPSLLEDSTF ES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G28470.1	9e-66	MYB family protein